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ncbi non redundant nr protein database  (Biotechnology Information)

 
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    Biotechnology Information ncbi non redundant nr protein database
    Ncbi Non Redundant Nr Protein Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Article Title: Genome-wide association study identifies candidate genes and SNPs associated with heat tolerance in the Chinese mitten crab (Eriocheir sinensis)
    Article Snippet: Annotated genes were further characterized using the National Center for Biotechnology Information (NCBI) non-redundant (nr) protein database and the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases.

    Article Title: Exploration of the Core Microorganisms and Mechanisms of Biogenic Amine Production During PDM Fermentations.
    Article Snippet: The single-gene sequences were then annotated according to their single-gene IDs using features from the National Centre for Biotechnology Information (NCBI) Non-Redundant (NR) Protein Database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database (Qianqian et al. 2023 )

    Article Title: Whole-Cell Biocatalysis for the Production of Structurally Diverse Methoxydihydrochalcones: Broad Activity of the Yarrowia Clade
    Article Snippet: Initial protein-protein BLAST (BLASTp) searches were conducted against the National Center for Biotechnology Information (NCBI) non-redundant (nr) protein database, which identified the protein KAG5370926.1 from Yarrowia sp. E02 as a high-confidence ortholog.

    Article Title: Transcriptomic investigation of agonistic behaviors of boxer shrimps (Stenopus species): insights into the potential neural signaling roles of dopamine and acetylcholine.
    Article Snippet: NCBI non-redundant (nr) protein database (Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information. https://www.ncbi.nlm.nih.gov/protein.

    Article Title: The effect of low-voltage electrostatic field on postharvest black spot disease and quality of apricot fruit
    Article Snippet: Apricot fruits are highly susceptible to Alternaria alternata infection after harvest, resulting in black spot disease and deterioration of fruit quality.. This study investigated the regulatory effects of low-voltage electrostatic field (LVEF) treatment on postharvest black spot disease in apricots.. Fruits inoculated with Alternaria alternata were stored at 25 ± 1 C and 80 ~ 85% relative humidity under an electric field strength of 1.5 kV.

    Article Title: ASAPv2: an improved platform for exploring gene function in Angelica sinensis.
    Article Snippet: We then conducted a comprehensive alignment of the predicted proteins of A. sinensis against several protein databases, including the National Center for Biotechnology Information (NCBI) non-redundant (NR) protein database (2024-02-07 downloaded), Universal Protein Resource (Uniprot, release-2024_05) (Including TrEMBL and SwissProt)[14], and The Arabidopsis Information Resource (TAIR10) protein database [15], utilizing the DIAMOND BLAST tool (v2.1.11.165) [16].



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    ncbi non redundant nr protein database  (Biotechnology Information)
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    Biotechnology Information ncbi non redundant nr protein database
    Ncbi Non Redundant Nr Protein Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Biotechnology Information ncbi non redundant protein nr database
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    ncbi non redundant protein sequences database nr  (Biotechnology Information)
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    Biotechnology Information ncbi non redundant protein sequences database nr
    (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
    Ncbi Non Redundant Protein Sequences Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ncbi non redundant 432 protein sequence database nr  (Biotechnology Information)
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    (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
    Ncbi Non Redundant 432 Protein Sequence Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ncbi non redundant protein sequence database nr  (Biotechnology Information)
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    Biotechnology Information ncbi non redundant protein sequence database nr
    (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
    Ncbi Non Redundant Protein Sequence Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ncbi+non+redundant+nr+protein+database/database+ncbi+non+redundant/pmc12947448-178-10-8
    Average 86 stars, based on 1 article reviews
    ncbi non redundant protein sequence database nr - by Bioz Stars, 2026-10
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    ncbi non redundant protein database nr  (Biotechnology Information)
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    Biotechnology Information ncbi non redundant protein database nr
    (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
    Ncbi Non Redundant Protein Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ncbi+non+redundant+nr+protein+database/database+ncbi+non+redundant/10__3390_slash_fishes11010023-75-27-25
    Average 86 stars, based on 1 article reviews
    ncbi non redundant protein database nr - by Bioz Stars, 2026-10
    86/100 stars
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    (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, NCBI ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.

    Journal: bioRxiv

    Article Title: An enzyme-level benchmark based on environmental bacterial laccases for predicting contaminant fate in water

    doi: 10.64898/2026.01.27.701970

    Figure Lengend Snippet: (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, NCBI ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.

    Article Snippet: The National Center for Biotechnology Information (NCBI) non-redundant protein sequences database (nr) was queried using BLASTP with the above-listed stringent homology parameters, resulting in 960 unique protein sequences.

    Techniques: Environmental Sampling